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CAZyme Gene Cluster: MGYG000004876_28|CGC1

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000004876_02267
hypothetical protein
CAZyme 10159 12690 + GH105
MGYG000004876_02268
hypothetical protein
CAZyme 12851 15721 + GH106
MGYG000004876_02269
Rhamnogalacturonan endolyase YesW
CAZyme 15737 17572 + PL11
MGYG000004876_02270
hypothetical protein
CAZyme 17604 19130 + GH28
MGYG000004876_02271
L-Rhamnulokinase
null 19279 20736 + FGGY_N| FGGY_C
MGYG000004876_02272
L-rhamnose isomerase
null 20801 22051 + RhaA
MGYG000004876_02273
L-rhamnose-proton symporter
TC 22073 23104 + 2.A.7.6.1
MGYG000004876_02274
Rhamnulose-1-phosphate aldolase
null 23212 24021 + Aldolase_II
MGYG000004876_02275
hypothetical protein
CAZyme 24092 25390 + GH105
MGYG000004876_02276
HTH-type transcriptional activator RhaS
TF 25517 26443 + HTH_AraC+HTH_AraC
MGYG000004876_02277
Exo-poly-alpha-D-galacturonosidase
CAZyme 27102 28523 + GH28
MGYG000004876_02278
Arylsulfatase
null 28577 29974 + Sulfatase
MGYG000004876_02279
TonB-dependent receptor SusC
TC 30207 33413 + 1.B.14.6.1
MGYG000004876_02280
hypothetical protein
null 33428 35425 + SusD-like_3| SusD_RagB
MGYG000004876_02281
hypothetical protein
CAZyme 35556 36932 + PL1| PL1_2
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000004876_02267 GH105_e12
MGYG000004876_02268 GH106_e0|3.2.1.174 pectin
MGYG000004876_02269 PL11_e1
MGYG000004876_02270 GH28_e61
MGYG000004876_02275 GH105_e39
MGYG000004876_02277 GH28_e26|3.2.1.- pectin
MGYG000004876_02281 PL1_e64|4.2.2.2 pectin

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location